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  <front>
    <journal-meta>
      <journal-id journal-id-type="publisher-id">JBD</journal-id>
      <journal-title-group>
        <journal-title>Journal of Bioinformatics And Diabetes</journal-title>
      </journal-title-group>
      <issn pub-type="epub">2374-9431</issn>
      <publisher>
        <publisher-name>Open Access Pub</publisher-name>
        <publisher-loc>United States</publisher-loc>
      </publisher>
    </journal-meta>
    <article-meta>
      <article-id pub-id-type="publisher-id">JBD-24-5077</article-id>
      <article-id pub-id-type="doi">10.14302/issn.2374-9431.jbd-24-5077</article-id>
      <article-categories>
        <subj-group>
          <subject>review-article</subject>
        </subj-group>
      </article-categories>
      <title-group>
        <article-title>A Systematic Review of Dengue Fever and Dengue-Associated Neurological Conditions Was Conducted in an Attempt to Better Understand This Disease</article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author">
          <name>
            <surname>Raúl</surname>
            <given-names>Isea</given-names>
          </name>
          <xref ref-type="aff" rid="idm1849163988">1</xref>
          <xref ref-type="aff" rid="idm1849164924">*</xref>
        </contrib>
      </contrib-group>
      <aff id="idm1849163988">
        <label>1</label>
        <addr-line>Fundación Instituto de Estudios Avanzados, Hoyo de la Puerta, Baruta, Venezuela</addr-line>
      </aff>
      <aff id="idm1849164924">
        <label>*</label>
        <addr-line>Corresponding Author </addr-line>
      </aff>
      <contrib-group>
        <contrib contrib-type="editor">
          <name>
            <surname>Majid</surname>
            <given-names>Kadhum</given-names>
          </name>
          <xref ref-type="aff" rid="idm1849029196">1</xref>
        </contrib>
      </contrib-group>
      <aff id="idm1849029196">
        <label>1</label>
        <addr-line>Department of Biochemistry, College of Medicine, University of Kufa, Najaf, Iraq.</addr-line>
      </aff>
      <author-notes>
        <corresp>Corresponding author: Raúl Isea, Fundación Instituto de Estudios Avanzados, Hoyo de la Puerta, Baruta, Venezuela. Email: <email>raul.isea@gmail.com</email></corresp>
        <fn fn-type="conflict" id="idm1849408812">
          <p>The authors have declared that no competing interests exist.</p>
        </fn>
      </author-notes>
      <pub-date pub-type="epub" iso-8601-date="2024-06-17">
        <day>17</day>
        <month>06</month>
        <year>2024</year>
      </pub-date>
      <volume>2</volume>
      <issue>1</issue>
      <fpage>1</fpage>
      <lpage>8</lpage>
      <history>
        <date date-type="received">
          <day>15</day>
          <month>04</month>
          <year>2024</year>
        </date>
        <date date-type="accepted">
          <day>14</day>
          <month>06</month>
          <year>2024</year>
        </date>
        <date date-type="online">
          <day>17</day>
          <month>06</month>
          <year>2024</year>
        </date>
      </history>
      <permissions>
        <copyright-statement>© </copyright-statement>
        <copyright-year>2024</copyright-year>
        <copyright-holder>Raúl Isea</copyright-holder>
        <license xlink:href="http://creativecommons.org/licenses/by/4.0/" xlink:type="simple">
          <license-p>This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
        </license>
      </permissions>
      <self-uri xlink:href="http://openaccesspub.org/jbd/article/2133">This article is available from http://openaccesspub.org/jbd/article/2133</self-uri>
      <abstract>
        <p>Dengue is a global arbovirus disease primarily carried by <italic>Aedes aegypti</italic> and               <italic>Aedes albopictus</italic> mosquitoes. It has four serotypes (DENV1, DENV2, DENV3, and DENV4) and is classified into distinct genotypes. The epidemic is                           complicated by immunological interactions and viral lineage turnover.                           Neurological problems are commonly associated with DENV2 and DENV3, with DENV2 displaying the most severe symptoms. Direct viral invasion,                         host-mediated immune system reactions, or host-mediated metabolic alterations can all result in dengue-related neurological issues. The three dengue vaccinations and the significance of meta-analyses for genetic data will also be covered. Finally, establish a connection with the microRNAs associated with    dengue fever, creating new opportunities for the creation of dengue treatment regimens involving microRNAs.</p>
      </abstract>
      <kwd-group>
        <kwd>Dengue fever</kwd>
        <kwd>Dengue hemorrhagic fever</kwd>
        <kwd>Dengue Shock syndrome</kwd>
        <kwd>Neurological Dengue</kwd>
        <kwd>microRNA</kwd>
      </kwd-group>
      <counts>
        <fig-count count="0"/>
        <table-count count="0"/>
        <page-count count="8"/>
      </counts>
    </article-meta>
  </front>
  <body>
    <sec id="idm1849024804" sec-type="intro">
      <title>Introduction</title>
      <p>The arbovirus disease dengue has spread around the world and is now an                  important threat to public health. From symptomatic dengue fever (DF), a small percentage of individuals may develop dengue hemorrhagic fever (DHF) or                dengue shock syndrome (DSS). Dengue is a single positive-stranded RNA virus from the <italic>Flaviviridae</italic> family (Genus <italic>Flavivirus</italic>) <xref ref-type="bibr" rid="ridm1841601548">37</xref><xref ref-type="bibr" rid="ridm1841630604">34</xref>. <italic>Aedes aegypti</italic> and               <italic>Aedes albopictus</italic> mosquitoes are the most common carriers of the dengue virus. It is the second most common mosquito-borne illness, after malaria. The clinical manifestations of hemorrhagic fever range from mild to severe.</p>
      <p>It consists of up of a 5' untranslated region, a large open reading frame (ORF) that encodes a polypeptide chain, and a 3' UTR. The virus's translation produces ten different viral proteins, both structural and nonstructural. Dengue's four serotypes (DENV1, DENV2, DENV3 and DENV4) are further classified into distinct                   genotypes. DENV1 has five genotypes (I-V), DENV2 has six (Southeast Asian/American), DENV3 has four (I-IV), and DENV4 has four (Southeast Asia,     America, Thailand, and Sylvatic) Sankoju et al., 2023. The dengue epidemic is complicated by immunological interactions among the four circulating serotypes and the constant turnover of viral lineages.</p>
      <p>The DENV genomic RNA encodes three structural proteins (C, PrM, and E) and seven non-structural proteins (NS1, NS2A, NS2B, NS3, NS4A, NS4B, and NS5) <xref ref-type="bibr" rid="ridm1841990388">4</xref>. Untranslated  sections (5′-UTR and 3′-UTR) surround the DENV open reading frame at both its 5′ and 3′ ends. The DENV genome contains a significant amount of variation <xref ref-type="bibr" rid="ridm1841679500">26</xref>.</p>
      <p>The infection confers lifelong protective immunity to the same subtype but no immunity to the other three serotypes <xref ref-type="bibr" rid="ridm1841675540">27</xref>. Furthermore, previous infection with a different subtype raises the risk of                     developing dengue hemorrhagic fever <xref ref-type="bibr" rid="ridm1841675540">27</xref>.  This is due to a phenomenon known as                                        antibody-dependent enhancement (ADE). In ADE, heterotypic non-neutralizing antibodies form                 complexes with dengue virus, infecting mononuclear phagocytes more efficiently. As a result, a greater number of host cells are infected, increasing viral replication and worsening clinical symptoms.</p>
      <p>The first confirmed outbreak of dengue virus occurred simultaneously in Asia, North America, and Africa in 1779 <xref ref-type="bibr" rid="ridm1841743372">11</xref>.  Dengue, which is already present in over a hundred countries, is spreading from tropical and subtropical regions due to climate change <xref ref-type="bibr" rid="ridm1841696324">23</xref>.  In October, Bangladesh had 359 fatalities and 67,769 cases, while India had 94,198 cases and 91 deaths. African countries with documented  cases include Angola, Burkina Faso, Chad, Côte d'Ivoire, Egypt, Ethiopia, Guinea, Mali, Mauritius, Sao Tome and Principe, Senegal, and Sudan.  In Americas are home to the majority of dengue                    infections, with approximately 3.7 million confirmed cases and 1700 deaths expected by 2023. </p>
      <p>There are four serotypes of dengue fever (DENV), ranging from DENV1 to DENV4, but neurological symptoms are frequently associated with DENV2 and DENV3 <xref ref-type="bibr" rid="ridm1841712060">19</xref>, with DENV 2 being the most  common serotype with the highest severity at our hospital <xref ref-type="bibr" rid="ridm1841758420">9</xref>.  In fact, DENV2 and DENV3 were  identified in cases of encephalitis, meningitis, and myelitis <xref ref-type="bibr" rid="ridm1841778988">5</xref>. DENV-4 was also detected in brain cells by immunohistochemistry and in cerebrospinal fluid (CSF) of a patient with encephalitis, whereas neurological symptoms have frequently been linked to DENV2 and DENV3 <xref ref-type="bibr" rid="ridm1841712060">19</xref>.</p>
      <p>It is critical to remember that dengue-related neurological problems are a complex issue caused by both the virus and the host <xref ref-type="bibr" rid="ridm1841639172">32</xref>. There are three potential mechanisms: the virus's direct invasion of the                   central nervous system, immune responses, and metabolic changes. Direct viral neurotropism is                   indicated by neurological involvement, the presence of CSF viral particles, and blood-brain barrier disruption. Recent studies suggest that neuroinflammation plays a role in dengue. Non-structural 1 antigen (NS1Ag) is linked to neurological symptoms and has been shown to induce cytokine release <xref ref-type="bibr" rid="ridm1841634708">33</xref>. Natural killer cells activate T-helper (Th) cells, which differentiate into Th17 and Th9 cells.</p>
      <p>The production of pro-inflammatory cytokines by these cells damages the blood-brain barrier and               allows other immune mediators to enter the brain, resulting in neuroinflammation <xref ref-type="bibr" rid="ridm1841634708">33</xref>.  Prior DENV infection-related neurological consequences were classified into three types: immunological responses, viral invasion, and metabolic abnormalities. DENV encephalopathy and encephalitis, especially in dengue-endemic areas, should be considered when making a differential diagnosis of various acute febrile encephalopathies, autoimmune encephalitides, and SARS-CoV2 infections.</p>
      <p>Dengue hemorrhagic fever (DHF) and dengue shock syndrome (DSS) were originally associated with it. According to recent research, dengue virus infection-related cytokine overproduction harms immune-mediated endothelial cells, increasing vascular permeability and fluid leakage, which may eventually result in global cerebral edema <xref ref-type="bibr" rid="ridm1841719620">17</xref>. Without supportive therapy, death rates could be significant, and treatment results can vary.</p>
      <p>It is interesting to note that "expanded dengue syndrome" (EDS) refers to dengue fever symptoms               affecting multiple organ systems Aris et al., 2022. This condition is more common in high-risk groups, including the elderly, pregnant women, children, hemoglobinopathies, patients with coronary artery disease, and those with compromised immune systems. EDS can cause complications in the  hematology, renal, gastrointestinal, respiratory, and cardiovascular systems. Pregnant women, young children, the elderly, those with hemoglobinopathies, and people with weakened immune systems are all at high risk Aris et al., 2022. </p>
      <p>
        <bold>and how does the dengue vaccination appear?</bold>
      </p>
      <p>The first is the live and attenuated tetravalent vaccination Qdenga® (also known as TAK-003),                 developed by the Japanese laboratory Takeda <xref ref-type="bibr" rid="ridm1841701220">22</xref>. After a year of use, the vaccine was found to be 80% effective when administered in two doses at three-month intervals. Indonesia approved its use in October 2022, and the European Union approved it in December 2022 <xref ref-type="bibr" rid="ridm1841701220">22</xref>. The United Kingdom               arrived in January 2023, followed by Brazil in the middle of the year.</p>
      <p>Intramuscular inoculation is required for individuals who have previously experienced dengue or to prevent it in those who have not contracted the virus. Qdenga®’s primary mechanism of action is local replication and the induction of neutralizing antibodies, which provide protection against dengue fever caused by any of the four dengue virus serotypes <xref ref-type="bibr" rid="ridm1841701220">22</xref>.</p>
      <p>Qdenga® activates a variety of immune system defense mechanisms, including complement-based inhibitors, complement-based fusion inhibitors, functional inhibitors against dengue 1's nonstructural protein (NS1), and cell-mediated immune responses (CD4+, CD8+, and natural killer cells). A 0.5 ml dose of the Qdenga vaccine contains live and attenuated fragments of all serotipos DENV1, DENV2, DENV3, and DENV4, with 3.3, 2.7, 4.0, and 4.5 &gt;= log10 UFP/dosis, respectively. </p>
      <p>On the other hand, the Advisory Committee on Immunization Practices recommends Dengvaxia®, the only dengue vaccine that is routinely used and approved by the US Food and Drug Administration <xref ref-type="bibr" rid="ridm1841691932">24</xref>.  Sanofi Pasteur is the manufacturer. The vaccine protects against illness caused by any of the four                 dengue virus serotypes. A dose contains the quimeric  dengue-fiebre amarilla virus (live and                          attenuated), and the DICC50/dosis for all serotypes ranges from 4.5 to 6.0 log10 DICC50 <xref ref-type="bibr" rid="ridm1841691932">24</xref>.  </p>
      <p>Sanofi Pasteur licensed the first dengue vaccine (Dengvaxia®) in Mexico in 2015, and more than 20 countries followed, based on the safety and efficacy of two phase III trials and a single season of                  disease surveillance <xref ref-type="bibr" rid="ridm1841642340">31</xref>. Unfortunately, the optimism that a dengue vaccine would finally be available was quickly dashed when a safety signal was detected in vaccine recipients who were dengue                          non-immune at the time of vaccination <xref ref-type="bibr" rid="ridm1841646804">30</xref>. In the third year of the phase III clinical trial, the                     youngest, non-immune vaccine recipients had higher rates of hospitalization and severe dengue than their unvaccinated counterparts <xref ref-type="bibr" rid="ridm1841752372">10</xref>.</p>
      <p>The Butantan-Dengue Vaccine, also called Butantan-DV, is similar to the NIH's previously tested TV003 formulation and was developed with ingredients licensed from the US NIH Hou et al., 2022. When they signed a co-development and licensing agreement in 2018, MSD joined the partnership. Participants in the phase III experiment, who ranged in age from 2 to 59 years old and received a single dose of vaccine, were monitored for any case of dengue, regardless of severity, caused by any strain of DENV <xref ref-type="bibr" rid="ridm1841642340">31</xref>. The trial began in 2016. The trial included both immune and non-immune individuals to dengue <xref ref-type="bibr" rid="ridm1841642340">31</xref>.</p>
      <p>The United States National Institutes of Health (NIH) has created two live-attenuated single-dose                 vaccine candidates, TV003 and TV005, using deletions and structural gene chimerization <xref ref-type="bibr" rid="ridm1841732572">14</xref>. These vaccines include DENV-1, DENV-3, and DENV-4 strains that have 30 nucleotide deletions for                    attenuation. In phase 1 trials, there was no difference in adverse events (AEs) between vaccine and placebo groups. Phase 2 and 3 trials are currently underway in Taiwan and Brazil <xref ref-type="bibr" rid="ridm1841732572">14</xref>.</p>
      <sec id="idm1848998164">
        <title>The importance of meta-analysis for genetic information</title>
        <p>Genome-wide association studies (GWAS) have identified specific genetic markers linked to increased susceptibility to dengue virus infection, which may also contribute to the development of                              dengue-related neurological disorders <xref ref-type="bibr" rid="ridm1841626212">35</xref>.</p>
        <p>Dengue-related neurological disorders are complex problems caused by both the virus and the host. There are three potential mechanisms: the virus's direct invasion of the central nervous system, immune responses, and metabolic changes <xref ref-type="bibr" rid="ridm1841639172">32</xref>. Direct viral neurotropism is indicated by neurological                       involvement, the presence of CSF viral particles, and blood-brain barrier disruption. Recent studies suggest that neuroinflammation plays a role in dengue. Nonstructural 1 antigen (NS1Ag) has also been linked to dengue's effect on the nervous system <xref ref-type="bibr" rid="ridm1841684396">25</xref>.</p>
        <p>A notable meta-analysis published in the Journal of Neurovirology reviewed existing studies to                   examine the neurological consequences of dengue fever <xref ref-type="bibr" rid="ridm1841746108">15</xref>. The study emphasized the need for                additional research to determine the underlying genetic and immunological factors that contribute to dengue fever's neurological manifestations <xref ref-type="bibr" rid="ridm1841761460">8</xref>. The study also emphasized the importance of early detection and intervention in mitigating the effects of dengue-related neurological disorders.</p>
        <p>The genome-wide association studies (GWAS) have identified two genes that are significantly                    associated with dengue-specific syndrome (DSS): the major histocompatibility complex (MHC) class I chain-related B (MICB) rs3132468 and the phospholipase C epsilon 1 (PLCE1) rs3765524 and rs3740360. These genes are associated with a milder form of dengue than DSS because they activate NK cells or innate lymphocytes during viral infection. However, their relationships with clinical                 outcomes of infectious diseases are unclear, with one study finding no link between MICB and PLCE1 genotypes and viremia levels or clinical features Faridah et al., 2023.</p>
        <p>Oliveira et al. (2018) conducted a population genetics-based meta-analysis of ten markers. Seven           markers (PLCE1, CD32, CD209, OAS1, and OAS3) have high-frequency MAF (20–50%), while three (MICB and TNFA genes) have intermediate-frequency MAF (5–20%). However, these markers have high discriminatory between population groups, particularly between sub-Saharan Africans and                  northeast/southeast Asia.</p>
        <p>These studies suggest that specific polymorphisms can confer susceptibility or protection against                 specific molecular phenomena in dengue patients. TNFA protects dengue fever (DF), CD32 protects DHF, and PLCE1, MICB, and OAS3 play a role in DSS. Meta-analyses showed similar OR values, with mild individual impact. However, the meta-analysis was not informative enough to replicate the significant association between CD209 and DF/DHF.</p>
        <p>The next strategy is to use microRNA, which can help with diagnosis and, eventually, vaccine                      development against dengue.</p>
      </sec>
      <sec id="idm1848995860">
        <title>microRNAs</title>
        <p>MicroRNAs (miRNAs) are small non-coding RNAs that play a crucial role in gene expression                     regulation. With over 2600 human miRNAs, they regulate the expression of about 60% of                             protein-coding genes in the human genome <xref ref-type="bibr" rid="ridm1841669060">28</xref>. </p>
        <p>As explained by O'Brien et al. (2018), the majority of miRNAs are transcribed from DNA sequences into primary miRNAs, which are then processed into precursor miRNAs and finally mature miRNAs. In most cases, miRNAs interact with the 3′ untranslated region (3′ UTR) of target mRNAs to cause mRNA degradation and translational repression. However, miRNAs have been shown to interact with other regions, such as the 5′ UTR, coding sequence, and gene promoters.</p>
        <p>Su et al. (2021) indicated that microRNAs, such as miR-548 g-3p, can inhibit DENV replication by directly targeting viral genome sequences. The DENV genome's 5'-UTR contains two essential viral replication elements: a large stem-loop (SLA) structure and a short stem-loop with a cyclization                  sequence (5'UAR). Overexpression of miR-484 and miR-744 can inhibit virus replication by                         interacting with the 3'UTRs of the four DENV serotypes. Furthermore, host miR-133a can target the  3'-UTRs of all four DENV serotypes, reducing endogenous miRNA-133a expression during the                   infection. This antiviral effect could be mediated by the regulation of the host factor polypyrimidine tract-binding protein <xref ref-type="bibr" rid="ridm1841766932">7</xref>.</p>
        <p>Su et al. (2021) also found that human primary monocytes and peripheral blood monocytes infected with DENV-2 showed a substantial upregulation of miR-146a. In addition, miR-146a targets TRAF6 and interleukin-1 receptor-associated kinase (IRAK1) to modulate the TLR signaling pathway and        lower IFN-I production, allowing the host to evade an immunological response <xref ref-type="bibr" rid="ridm1841739916">12</xref>.</p>
        <p>Yan et al. (2014) found that miR-252 was highly expressed in a DENV-2 infection model, down                 regating the expression of the E protein, which plays a crucial role in virus attachment, fusion, and  assembly. This has led to the exploration of miRNA-based drug discovery. Lee et al. (2017) found that the water extract of Flos Lonicerae can upregulate Let-7a expression in human and mouse blood, which can target the NS1 region of DENV-2 to inhibit its replication. This study provides new insights for the prevention and treatment of DENV infection through the induction of innate miRNA Let-7a by                    honeysuckle. MiRNAs that promote viral replication by targeting viral genomes play a direct role in regulating viral infection and miRNA expression, potentially avoiding excessive production of cellular inflammatory factors and reducing the risk of dengue fever.</p>
        <p>Castrillon-Betancur and Urcuqui-Inchima (2017) identified three miRNA candidates that might                   possibly inhibit DENV replication using bioinformatics predictions. They anticipated that a functional miRNA was conserved across all DENV serotypes and found miRNA candidate target locations in the 3'UTR of all four dengue serotypes. As a consequence, they postulated that miR-133a, miR-484, and miR-744 might inhibit DENV replication by targeting the DENV RNA genome's 3'UTR, especially the 3'stem loop, which includes components crucial in genome circularization and viral viability <xref ref-type="bibr" rid="ridm1841986068">2</xref>.               Indeed, overexpression of miR-133a, miR-484, and miR-744 in Vero cells was experimentally                     confirmed to demonstrate the potency of these three miRNAs in inhibiting DENV replication.</p>
      </sec>
    </sec>
    <sec id="idm1848997588" sec-type="conclusions">
      <title>Conclusion</title>
      <p>The complex relationship between dengue fever and its neurological aftereffects has been shown by the current investigation. New avenues for understanding and potentially mitigating the neurological                  impact of dengue virus (DENV) infection have been opened up by the discovery of genetic markers, including genome-wide association studies (GWAS), and the exploration of the underlying                          mechanisms of dengue virus neural invasion. Finally, new insights for the development of                            miRNA-based therapeutics will come from an understanding of the production and function of                       miRNAs during DENV infection and the associated signal molecules in the miRNA-mediated                       regulatory network.</p>
    </sec>
  </body>
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